TECHNOLOGY FOCUS - ENVIRONMENT - Preferred Process: The solid or liquid and biological mixture is transferred between any combination of anaerobic or aerobic controlled containments, to improve the characteristic of the contained evolving organism population and processing of the degradable materials. The augmented, adapted, and continually evolving microorganism population is adjusted and controlled in the changing conditions within the containment structures or sites through the manipulation of biological exposure, organics content, oxygen content, temperature, toxin content, nutrient addition, or any other controllable parameter. The liquid or solid is processed with any combination of sequential anaerobic or aerobic conditions, within containments or sites, enhanced with additives, augmented with offsite organisms, and augmented with nutrients such that the biological organisms and nutrients found within are capable of increasing vitality, disease resistance, insect resistance, or growth in plants in quantity greater than 500 gallons. The aerobic or anaerobic mixtures of liquids or solids and the associated augmented biological organisms are cycled through the containment structures or sites such that even highly toxic or persistent contaminants are degraded and diluted such that: the mixture to be released or transferred to another location per regulatory policy as clean of degrading biological organisms and/or contaminants; large numbers of contaminant degrading biological organisms are present; a regulatory defined, small amount of contamination and large numbers of contaminant degrading biological organisms are present in the discharge or transfer; the mixture to be released per regulatory policy is used as treatment option for injection into the current site; the mixture to be released per regulatory policy is used as treatment option for injection into another site; and continuous input of contaminated materials into the treatment system results in continuous output of treated material from another portion of the system; where multiple combination of the above conditions exist simultaneously within the system. The solid surface of the containment is aerobically treated with aerated liquid to become a biofilter or the containment is covered with aerobically treated materials to become a biofilter to consume emissions that are produced beneath and eliminate or minimize the need for a gas collection system. The excavation of solids occurs to remove organisms for use elsewhere or to increases internal flow of liquid and organisms within the material. The use of controlling features such as manipulation, addition to, concentration of, and/or removal of isolated organisms to, or acclimate them to another location's conditions and therefore develop modified processing capabilities for use at another sites with differing oxygen or contamination conditions such that the input mixture eliminates or reduces the source of contamination or a resultant plume within the in-situ contaminated material while none or some portion of the input mixture is recovered for processing, reinjection, or augmentation. The biological organisms mixtures found in multiple sites are actively exchanged, mixed, trained with contaminants, nutrients, conditions, or otherwise acclimated to destination conditions, within the liquids and solids of the initial containment structures and sites. The biological organisms mixtures and contamination are manipulated, cycled, diluted, concentrated, and treated with any combination of additives, contaminants, cultured organisms, nutrients, or any type of concentration device while within or during transfer between the containment structures, sites, discharge structures, or off site transport such that the contaminate is reduced, and the biological ability of the mixture to reduce is enhanced. The biological organisms mixtures are extracted and transported between the sites are biologically protected with regards to atmosphere, adequate energy sources, temperature, or any other condition variable within the liquids and solids to optimize treatment capabilities of the delivered organisms. The improvement furnished by the process is comprised of: increased flow of liquids, nutrients, gas, solids, and/or organisms (elements) and exposure of the targeted materials control the speed and effectiveness of degradation; manipulation and material handling that creates and optimizes flow, delivery, and exposure; induced internal flow and/or exposure due to pressure, vacuum, and other utilization of energy; flexible cover or covers that expand and contract to store energy for use as is needed and maintains positive or negative pressure of either an aerobic or aerobic nature that isolates and increase internal flow; flexible portions of covers that expand and contract as is needed and maintains positive or negative pressure that isolate the system and increase internal flow; channels placed in the solids, at an interval dependant on the targeted materials, that increase the release gas, liquids, and/or organisms and increase internal flow; channels for the routing of liquids, nutrients, gas, solids, and/or organisms beneath the cover; permeable materials arranged on the containment, site perimeter, solids or liquids for the routing of gas and liquid beneath the cover; addition locations for liquids, organisms, solids, and/or gas in the solids such that internal flow, chemical exposure, and biological exposure is improved; vacuum, siphon, or manipulation of gravity applied at various points within the solids or beneath the cover such that the applied vacuum, siphon, or manipulation of gravity increases internal flow and exposure of the targeted materials; and drainage cut in the solids such that flow of gas, liquid, and organisms work in conjunction with the injection and the vacuum. The mixtures of elements are added to at least one location in the solid or liquid and removed from other locations, such that a system with optimized flow and treatment involves at least one of the following arrangements: at least one element extraction system that increases internal flow of elements through vacuum, pumping, siphon, or any other process in excess of gravity drainage in containment structures or sites; at least one elements injection system that increases internal flow of elements through vacuum, pumping, siphon, or any other process in excess of gravity drainage in containment structures or sites; extraction points for elements dislodged from the targeted material; sealed extraction points of the solids, covers, or outer surface features such as pipes or voids that facilitate enhanced or controlled internal flow of elements; accelerated removal and/or harvesting of live organisms, preservation of population, and increasing population during removal and deposition of organisms resulting from the liquid extraction, sustaining material addition, pressure and/or accelerated internal flows; element removal that creates an accelerated migration of liquids, nutrients, gas, solids, and/or organisms that was resident to other portions of the containment structure towards the extraction point; sealed extraction points or outer surface features such as pipes or voids that are utilized to induce, isolate, modify, treat, or otherwise manipulate both internal flow of liquid and movement of live organisms from the interior of the in-situ and ex-situ applications; solids that are partially to completely saturated with liquids in order to induce and control internal flow of any combination of liquid, oxygenated liquid, anaerobic liquid, gas, or organisms when the elements are added and removed; and direct aeration of saturated or flooded solids or the removal of elements in combination with the addition of aerated liquid such that the saturated solid-liquid mixture has an increased oxygen content and increased aerobic digestion. The method involves following practices or features to improve flow and conditions for proliferation of biological activity: inflated bladders or materials with insulating characteristic are added to at least one point on the liquid or solid surface; liquids, nutrients, gas, solids, and/or organisms under the cover are heated or cooled directly; containments are built below grade or of sufficient thickness to capture the insulating character of the soils; gas is heated or cooled externally and added while cooler atmosphere or liquid is extracted elsewhere in the system, reused or removed from the system; liquid is heated or cooled externally and added while cooler or warmer atmosphere or liquid is extracted elsewhere in the system, reused or removed from the system; and heating, cooling, and transfer are done to maintain, enhance, or otherwise to manipulate the desired biological activity and conditions. The liquids, nutrients, gas, solids, and/or organisms are discarded, processed elsewhere for disposal, utilized in other areas of the current containment, utilized at other ex-situ sites, utilized for in-situ treatment of the current site, utilized for in-situ treatment of other sites, produce combustible gas in an accelerated schedule and volume, or are utilized to develop improved plant characteristics. There is utilization of a system, or independent or dependent covers to accomplish any or all of the following functions: shed or capture precipitation; isolate the atmosphere around materials while controlling gas or emissions; retain or dissipate heat and collect, isolate, or disburse solar energy; and increase or decrease evaporation. The elements are collected, made anaerobic or aerobic in the collection points or elsewhere, combined with liquids, nutrients, gas, solids, and/or organisms, placed into or out of the system to achieve benefit. The enriched liquids and/or elements flood or saturate existing solids, liquids, nutrients, gas, solids, and/or organisms and are drawn out and placed elsewhere in the containment or outside the containment such that the liquids, nutrients, gas, solids, and/or organisms that are cycled through the system, utilized elsewhere, or discharged from the system in a continuous manner to maintain optimized processing. EXAMPLE - No suitable example is given.